STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ97529.1N-acetylmuramoyl-L-alanine amidase; KEGG: sgt:SGGB_1046 1.8e-31 gtfB; glucosyltransferase; Psort location: Extracellular, score: 9.73. (535 aa)    
Predicted Functional Partners:
ERJ97600.1
Hypothetical protein; KEGG: sha:SH0994 0.0081 agrC; AgrC protein; K07706 two-component system, AgrA family, sensor histidine kinase AgrC; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.593
ERJ97528.1
Putative calcium-translocating P-type ATPase, PMCA-type; KEGG: eha:Ethha_1336 2.1e-224 P-type HAD superfamily ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.572
ERJ97527.1
Putative bactoprenol glucosyl transferase-like protein; KEGG: cbk:CLL_A2508 4.6e-108 bactoprenol glucosyl transferase; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.569
ERJ97525.1
Hypothetical protein.
       0.568
ERJ97526.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: bbp:BBPR_1374 2.7e-112 oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
       0.568
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.