STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ97390.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (369 aa)    
Predicted Functional Partners:
ERJ94886.1
Putative translation elongation factor Tu; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 0.954
ERJ97389.1
AIG2-like family protein; KEGG: dre:406278 1.6e-11 ggctb, fj35c05, ggct, wu:fj35b07, wu:fj35c05, zgc:56140; gamma-glutamyl cyclotransferase b K00682; Psort location: Cytoplasmic, score: 7.50.
 
    0.944
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.867
ERJ86856.1
Hypothetical protein; KEGG: dre:406278 4.8e-06 ggctb, fj35c05, ggct, wu:fj35b07, wu:fj35c05, zgc:56140; gamma-glutamyl cyclotransferase b K00682.
 
    0.780
ERJ87037.1
AIG2-like family protein; KEGG: dre:406278 3.4e-09 ggctb, fj35c05, ggct, wu:fj35b07, wu:fj35c05, zgc:56140; gamma-glutamyl cyclotransferase b K00682; Psort location: CytoplasmicMembrane, score: 9.55.
 
    0.777
ERJ97388.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.762
ERJ97451.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.751
ERJ96581.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: dku:Desku_2679 2.7e-110 sarcosine oxidase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.736
ERJ94809.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: dku:Desku_2679 8.1e-111 sarcosine oxidase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.736
ERJ96489.1
Hypothetical protein.
 
     0.732
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.