Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ97429.1 | ERJ97432.1 | RUMCAL_00212 | RUMCAL_00215 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | 0.949 |
ERJ97429.1 | ERJ97433.1 | RUMCAL_00212 | RUMCAL_00216 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.939 |
ERJ97429.1 | ERJ97434.1 | RUMCAL_00212 | RUMCAL_00217 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.939 |
ERJ97429.1 | ERJ97435.1 | RUMCAL_00212 | RUMCAL_00218 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.932 |
ERJ97429.1 | ERJ97437.1 | RUMCAL_00212 | RUMCAL_00220 | Hypothetical protein. | Hypothetical protein. | 0.928 |
ERJ97429.1 | ERJ97438.1 | RUMCAL_00212 | RUMCAL_00221 | Hypothetical protein. | TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 8.16. | 0.890 |
ERJ97429.1 | ERJ97439.1 | RUMCAL_00212 | RUMCAL_00222 | Hypothetical protein. | Hypothetical protein; KEGG: bbe:BBR47_20730 0.0040 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 7.50. | 0.880 |
ERJ97429.1 | ERJ97440.1 | RUMCAL_00212 | RUMCAL_00223 | Hypothetical protein. | Hypothetical protein; KEGG: msl:Msil_1626 0.0063 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 7.50. | 0.865 |
ERJ97429.1 | ERJ97441.1 | RUMCAL_00212 | RUMCAL_00224 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.863 |
ERJ97429.1 | ERJ97446.1 | RUMCAL_00212 | RUMCAL_00229 | Hypothetical protein. | DNA adenine methylase; KEGG: sgy:Sgly_0076 2.7e-87 D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase; Psort location: Cytoplasmic, score: 7.50. | 0.849 |
ERJ97432.1 | ERJ97429.1 | RUMCAL_00215 | RUMCAL_00212 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein. | 0.949 |
ERJ97432.1 | ERJ97433.1 | RUMCAL_00215 | RUMCAL_00216 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.942 |
ERJ97432.1 | ERJ97434.1 | RUMCAL_00215 | RUMCAL_00217 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.934 |
ERJ97432.1 | ERJ97435.1 | RUMCAL_00215 | RUMCAL_00218 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.932 |
ERJ97432.1 | ERJ97437.1 | RUMCAL_00215 | RUMCAL_00220 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein. | 0.929 |
ERJ97432.1 | ERJ97438.1 | RUMCAL_00215 | RUMCAL_00221 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 8.16. | 0.904 |
ERJ97432.1 | ERJ97439.1 | RUMCAL_00215 | RUMCAL_00222 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein; KEGG: bbe:BBR47_20730 0.0040 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 7.50. | 0.886 |
ERJ97432.1 | ERJ97440.1 | RUMCAL_00215 | RUMCAL_00223 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein; KEGG: msl:Msil_1626 0.0063 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 7.50. | 0.866 |
ERJ97432.1 | ERJ97441.1 | RUMCAL_00215 | RUMCAL_00224 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.863 |
ERJ97432.1 | ERJ97446.1 | RUMCAL_00215 | RUMCAL_00229 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16. | DNA adenine methylase; KEGG: sgy:Sgly_0076 2.7e-87 D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase; Psort location: Cytoplasmic, score: 7.50. | 0.854 |
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