STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ97451.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (365 aa)    
Predicted Functional Partners:
ERJ97450.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.936
ERJ97446.1
DNA adenine methylase; KEGG: sgy:Sgly_0076 2.7e-87 D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase; Psort location: Cytoplasmic, score: 7.50.
 
     0.862
ERJ97441.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.852
ERJ97440.1
Hypothetical protein; KEGG: msl:Msil_1626 0.0063 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 7.50.
 
     0.849
ERJ97438.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.832
ERJ97439.1
Hypothetical protein; KEGG: bbe:BBR47_20730 0.0040 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 7.50.
 
     0.824
ERJ97435.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.823
ERJ97433.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.822
ERJ97434.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.822
ERJ97437.1
Hypothetical protein.
 
     0.821
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.