STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ97184.1KEGG: lml:lmo4a_0041 1.4e-05 agrB; accessory gene regulator protein B K07813; Psort location: CytoplasmicMembrane, score: 10.00. (193 aa)    
Predicted Functional Partners:
ERJ97581.1
Hypothetical protein; KEGG: awo:Awo_c33370 6.2e-18 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.840
ERJ97570.1
Hypothetical protein; KEGG: awo:Awo_c33370 8.0e-20 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.808
ERJ97473.1
Hypothetical protein; KEGG: awo:Awo_c32520 8.4e-22 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.804
ERJ94161.1
Putative flagellar protein FliS; KEGG: scp:HMPREF0833_10274 4.1e-23 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.804
ERJ97185.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
ERJ94467.1
Hypothetical protein; KEGG: awo:Awo_c33370 2.7e-17 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.744
ERJ97108.1
Hypothetical protein; KEGG: awo:Awo_c32520 2.1e-18 sensor histidine kinase.
 
  
  0.712
ERJ97424.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bpb:bpr_I2098 3.4e-21 two component system histidine kinase; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.704
ERJ96607.1
Hypothetical protein; KEGG: awo:Awo_c32520 3.6e-09 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.691
ERJ97584.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: scp:HMPREF0833_10274 2.7e-21 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.647
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.