Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ96911.1 | ERJ96928.1 | RUMCAL_00713 | RUMCAL_00711 | O-antigen polymerase; KEGG: bpt:Bpet1821 0.0075 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242; Psort location: CytoplasmicMembrane, score: 10.00. | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | 0.439 |
ERJ96911.1 | ERJ96929.1 | RUMCAL_00713 | RUMCAL_00712 | O-antigen polymerase; KEGG: bpt:Bpet1821 0.0075 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.439 |
ERJ96926.1 | ERJ96927.1 | RUMCAL_00709 | RUMCAL_00710 | Stage II sporulation protein P; Psort location: Cytoplasmic, score: 7.50. | KEGG: sku:Sulku_0529 9.1e-23 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB; Psort location: Cytoplasmic, score: 7.50. | 0.578 |
ERJ96926.1 | ERJ96928.1 | RUMCAL_00709 | RUMCAL_00711 | Stage II sporulation protein P; Psort location: Cytoplasmic, score: 7.50. | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | 0.418 |
ERJ96926.1 | ERJ96929.1 | RUMCAL_00709 | RUMCAL_00712 | Stage II sporulation protein P; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.418 |
ERJ96927.1 | ERJ96926.1 | RUMCAL_00710 | RUMCAL_00709 | KEGG: sku:Sulku_0529 9.1e-23 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB; Psort location: Cytoplasmic, score: 7.50. | Stage II sporulation protein P; Psort location: Cytoplasmic, score: 7.50. | 0.578 |
ERJ96927.1 | ERJ96928.1 | RUMCAL_00710 | RUMCAL_00711 | KEGG: sku:Sulku_0529 9.1e-23 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB; Psort location: Cytoplasmic, score: 7.50. | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | 0.550 |
ERJ96927.1 | ERJ96929.1 | RUMCAL_00710 | RUMCAL_00712 | KEGG: sku:Sulku_0529 9.1e-23 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.543 |
ERJ96928.1 | ERJ96911.1 | RUMCAL_00711 | RUMCAL_00713 | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | O-antigen polymerase; KEGG: bpt:Bpet1821 0.0075 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242; Psort location: CytoplasmicMembrane, score: 10.00. | 0.439 |
ERJ96928.1 | ERJ96926.1 | RUMCAL_00711 | RUMCAL_00709 | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | Stage II sporulation protein P; Psort location: Cytoplasmic, score: 7.50. | 0.418 |
ERJ96928.1 | ERJ96927.1 | RUMCAL_00711 | RUMCAL_00710 | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | KEGG: sku:Sulku_0529 9.1e-23 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB; Psort location: Cytoplasmic, score: 7.50. | 0.550 |
ERJ96928.1 | ERJ96929.1 | RUMCAL_00711 | RUMCAL_00712 | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.773 |
ERJ96929.1 | ERJ96911.1 | RUMCAL_00712 | RUMCAL_00713 | Hypothetical protein. | O-antigen polymerase; KEGG: bpt:Bpet1821 0.0075 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242; Psort location: CytoplasmicMembrane, score: 10.00. | 0.439 |
ERJ96929.1 | ERJ96926.1 | RUMCAL_00712 | RUMCAL_00709 | Hypothetical protein. | Stage II sporulation protein P; Psort location: Cytoplasmic, score: 7.50. | 0.418 |
ERJ96929.1 | ERJ96927.1 | RUMCAL_00712 | RUMCAL_00710 | Hypothetical protein. | KEGG: sku:Sulku_0529 9.1e-23 polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB; Psort location: Cytoplasmic, score: 7.50. | 0.543 |
ERJ96929.1 | ERJ96928.1 | RUMCAL_00712 | RUMCAL_00711 | Hypothetical protein. | Cof-like hydrolase; KEGG: ctu:CTU_00420 6.2e-26 yidA; sugar phosphate phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. | 0.773 |