node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ87863.1 | ERJ92506.1 | RUMCAL_03229 | RUMCAL_02345 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 9.8e-12 YajC K03210; Psort location: CytoplasmicMembrane, score: 9.99. | 0.450 |
ERJ87863.1 | queA | RUMCAL_03229 | RUMCAL_00819 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.584 |
ERJ87863.1 | rnc | RUMCAL_03229 | RUMCAL_02369 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.688 |
ERJ87863.1 | ruvA | RUMCAL_03229 | RUMCAL_00964 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.564 |
ERJ87863.1 | ruvB | RUMCAL_03229 | RUMCAL_00963 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.438 |
ERJ87863.1 | tgt | RUMCAL_03229 | RUMCAL_00818 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.611 |
ERJ92506.1 | ERJ87863.1 | RUMCAL_02345 | RUMCAL_03229 | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 9.8e-12 YajC K03210; Psort location: CytoplasmicMembrane, score: 9.99. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.450 |
ERJ92506.1 | queA | RUMCAL_02345 | RUMCAL_00819 | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 9.8e-12 YajC K03210; Psort location: CytoplasmicMembrane, score: 9.99. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.484 |
ERJ92506.1 | tgt | RUMCAL_02345 | RUMCAL_00818 | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 9.8e-12 YajC K03210; Psort location: CytoplasmicMembrane, score: 9.99. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.445 |
ERJ96893.1 | ERJ96894.1 | RUMCAL_00820 | RUMCAL_00821 | Hypothetical protein. | KEGG: ral:Rumal_2228 6.7e-155 aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97. | 0.773 |
ERJ96893.1 | queA | RUMCAL_00820 | RUMCAL_00819 | Hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.518 |
ERJ96894.1 | ERJ96893.1 | RUMCAL_00821 | RUMCAL_00820 | KEGG: ral:Rumal_2228 6.7e-155 aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein. | 0.773 |
ERJ96894.1 | queA | RUMCAL_00821 | RUMCAL_00819 | KEGG: ral:Rumal_2228 6.7e-155 aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.577 |
ERJ96894.1 | tgt | RUMCAL_00821 | RUMCAL_00818 | KEGG: ral:Rumal_2228 6.7e-155 aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.578 |
queA | ERJ87863.1 | RUMCAL_00819 | RUMCAL_03229 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.584 |
queA | ERJ92506.1 | RUMCAL_00819 | RUMCAL_02345 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 9.8e-12 YajC K03210; Psort location: CytoplasmicMembrane, score: 9.99. | 0.484 |
queA | ERJ96893.1 | RUMCAL_00819 | RUMCAL_00820 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Hypothetical protein. | 0.518 |
queA | ERJ96894.1 | RUMCAL_00819 | RUMCAL_00821 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | KEGG: ral:Rumal_2228 6.7e-155 aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97. | 0.577 |
queA | queC | RUMCAL_00819 | RUMCAL_03058 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Protein ExsB; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). | 0.483 |
queA | queH | RUMCAL_00819 | RUMCAL_02268 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). | 0.512 |