Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ94957.1 | ERJ96684.1 | RUMCAL_01776 | RUMCAL_00937 | KEGG: ral:Rumal_0627 1.5e-166 glyceraldehyde-3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.67. | MATE efflux family protein; KEGG: ssr:SALIVB_2015 5.1e-21 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. | 0.448 |
ERJ96684.1 | ERJ94957.1 | RUMCAL_00937 | RUMCAL_01776 | MATE efflux family protein; KEGG: ssr:SALIVB_2015 5.1e-21 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. | KEGG: ral:Rumal_0627 1.5e-166 glyceraldehyde-3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.67. | 0.448 |
ERJ96684.1 | ERJ96685.1 | RUMCAL_00937 | RUMCAL_00938 | MATE efflux family protein; KEGG: ssr:SALIVB_2015 5.1e-21 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Extracellular, score: 8.91. | 0.536 |
ERJ96685.1 | ERJ96684.1 | RUMCAL_00938 | RUMCAL_00937 | Hypothetical protein; Psort location: Extracellular, score: 8.91. | MATE efflux family protein; KEGG: ssr:SALIVB_2015 5.1e-21 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. | 0.536 |