STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ96606.1Hypothetical protein; KEGG: bpb:bpr_III219 4.0e-12 two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00. (477 aa)    
Predicted Functional Partners:
ERJ96605.1
LytTr DNA-binding domain protein; KEGG: sgg:SGGBAA2069_c05640 5.3e-06 fasA; Chemotaxis response regulator protein K07707; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.909
ERJ97424.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bpb:bpr_I2098 3.4e-21 two component system histidine kinase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.823
ERJ97108.1
Hypothetical protein; KEGG: awo:Awo_c32520 2.1e-18 sensor histidine kinase.
  
  
 0.823
ERJ94893.1
KEGG: ppo:PPM_2376 2.0e-10 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.814
ERJ96607.1
Hypothetical protein; KEGG: awo:Awo_c32520 3.6e-09 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.813
ERJ97569.1
LytTr DNA-binding domain protein; KEGG: ppo:PPM_2376 2.0e-13 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.812
ERJ97583.1
LytTr DNA-binding domain protein; KEGG: bde:BDP_0507 8.9e-10 two-component response regulator.
 
 
  0.811
ERJ97582.1
KEGG: ppo:PPM_2376 1.0e-16 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 9.95.
 
 
  0.804
ERJ94891.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bde:BDP_0479 6.3e-21 histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.801
ERJ97474.1
LytTr DNA-binding domain protein; KEGG: ppo:PPM_2376 6.6e-22 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 9.97.
 
 
  0.796
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.