STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ96487.1Phage protein, HK97 gp10 family; Psort location: Cytoplasmic, score: 7.50. (122 aa)    
Predicted Functional Partners:
ERJ96485.1
Phage major tail protein, phi13 family; KEGG: bao:BAMF_3080 0.0036 UDP-N-acetylmuramoylalanine-D-glutamate ligase UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase.
 
     0.947
ERJ96486.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.947
ERJ96484.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.944
ERJ96483.1
Hypothetical protein.
 
     0.931
ERJ96480.1
Hypothetical protein; KEGG: mif:Metin_1029 0.0073 valyl-tRNA synthetase; K01873 valyl-tRNA synthetase; Psort location: Extracellular, score: 8.91.
 
     0.783
ERJ95643.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
 
     0.783
ERJ95645.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.779
ERJ95646.1
Phage major tail protein, phi13 family; KEGG: bao:BAMF_3080 5.0e-06 UDP-N-acetylmuramoylalanine-D-glutamate ligase UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase.
 
     0.779
ERJ95647.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.779
ERJ90587.1
Hypothetical protein; KEGG: cbi:CLJ_B3161 0.0085 peptidase, M20/M25/M40 family.
 
     0.779
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.