STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ96408.1Glutamine ABC transporter, ATP-binding protein GlnQ; KEGG: eel:EUBELI_01396 5.2e-77 polar amino acid transport system ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96. (252 aa)    
Predicted Functional Partners:
ERJ96413.1
Hypothetical protein; KEGG: stj:SALIVA_1554 2.1e-21 glnP; glutamine ABC transporter permease and substrate binding protein.
 
 0.999
ERJ96414.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 7.0e-34 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
ERJ96409.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 5.4e-27 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.996
ERJ96410.1
ABC transporter, substrate-binding protein, family 3; KEGG: ebe:B21_00795 1.4e-21 glnH; glnH, subunit of glutamine ABC transporter K10036; Belongs to the bacterial solute-binding protein 3 family.
 
 0.973
ERJ96415.1
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: ral:Rumal_0615 9.6e-92 ABC transporter-like protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 
0.944
ERJ96411.1
Hypothetical protein.
       0.667
ERJ91705.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_1347 6.4e-63 yknZ; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.658
ERJ92208.1
Glutamate synthase [NADPH], large subunit; KEGG: cle:Clole_4244 0. glutamate synthase K00284; Psort location: CytoplasmicMembrane, score: 8.16.
  
  
 0.570
ERJ96412.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.497
ERJ96416.1
Acetyltransferase, GNAT family; KEGG: sri:SELR_10610 5.1e-22 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.444
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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