STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ96423.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
ERJ96422.1
Hypothetical protein.
       0.773
ERJ96424.1
KEGG: afm:AFUA_6G10430 4.1e-05 chitin deacetylase K01452; Psort location: Cytoplasmic, score: 7.50.
       0.697
ERJ96425.1
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: cls:CXIVA_06610 3.0e-40 BtuR; ATP:corrinoid adenosyltransferase; K00798 cob(I)alamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.697
fucI
Arabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
       0.554
ERJ96419.1
Putative L-fucose mutarotase; KEGG: cce:Ccel_1010 1.6e-50 RbsD or FucU transport protein; K02431 L-fucose mutarotase; Psort location: Cytoplasmic, score: 9.97; Belongs to the RbsD / FucU family.
       0.544
ERJ96420.1
Carbohydrate kinase, FGGY family protein; KEGG: ccb:Clocel_1500 1.3e-121 carbohydrate kinase; K00848 rhamnulokinase; Psort location: Cytoplasmic, score: 7.50.
       0.544
ERJ96417.1
Hypothetical protein.
       0.514
ERJ96418.1
Putative L-ribulose-5-phosphate 4-epimerase; KEGG: ccb:Clocel_1502 1.5e-95 class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase; Psort location: Cytoplasmic, score: 7.50.
       0.514
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.