STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ96104.1Cellulose binding domain protein; KEGG: ral:Rumal_2448 3.5e-181 cellulase; Psort location: Extracellular, score: 9.73. (895 aa)    
Predicted Functional Partners:
ERJ92483.1
Cellulase; KEGG: cac:CA_C0826 5.4e-82 endoglucanase 5; K01179 endoglucanase; Psort location: Cellwall, score: 9.20.
 
 0.879
ERJ92196.1
Carbohydrate binding domain protein; KEGG: cle:Clole_0675 4.8e-177 cellulose 1,4-beta-cellobiosidase; Psort location: Extracellular, score: 9.98.
 
 0.869
ERJ96387.1
Cellulase; KEGG: ral:Rumal_0564 5.2e-93 cellulase K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 0.866
ERJ96754.1
Ricin-type beta-trefoil lectin domain protein; KEGG: chu:CHU_1157 1.0e-168 rhamnogalacturonan lyase; Psort location: CytoplasmicMembrane, score: 9.87.
 
 0.853
ERJ96920.1
GDSL-like protein; KEGG: sce:YDL037C 7.2e-13 BSC1; Bsc1p; K01178 glucoamylase; Psort location: Cellwall, score: 9.21.
  
  0.829
ERJ96956.1
Glycosyltransferase family 36; KEGG: ccl:Clocl_0464 0. cellobiose phosphorylase; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
  0.814
ERJ89863.1
Cellulase; KEGG: cpy:Cphy_1163 1.1e-163 cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.799
ERJ87456.1
Cellulase; KEGG: ckn:Calkro_0854 4.0e-141 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.799
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.772
ERJ97032.1
Glycosyl hydrolase family 10; KEGG: ral:Rumal_1460 2.0e-100 endo-1,4-beta-xylanase K01181; Psort location: Extracellular, score: 9.98.
  
  
 0.754
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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