STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ94942.1Mannosyltransferase B family protein; KEGG: hna:Hneap_0494 1.4e-49 group 1 glycosyl transferase; K12994 alpha-1,3-rhamnosyltransferase; Psort location: Cytoplasmic, score: 7.50. (369 aa)    
Predicted Functional Partners:
ERJ94944.1
Putative GDP-mannose 4,6-dehydratase; KEGG: pjd:Pjdr2_3512 6.9e-66 NAD-dependent epimerase/dehydratase; K01711 GDPmannose 4,6-dehydratase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.930
ERJ94943.1
Glycosyltransferase, group 1 family protein; KEGG: hpk:Hprae_0340 4.6e-69 group 1 glycosyl transferase; K12995 rhamnosyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
    
0.834
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.685
ERJ91418.1
KEGG: ccb:Clocel_3354 8.1e-182 1,4-alpha-glucan-branching protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 7.50.
   
 0.685
ERJ94945.1
Hypothetical protein; KEGG: tal:Thal_0218 0.00031 metal dependent phosphohydrolase K06950; Psort location: Cytoplasmic, score: 7.50.
       0.645
ERJ93754.1
Glycosyltransferase, group 1 family protein; KEGG: rci:RCIX218 1.6e-52 putative glycosyltransferase (group 1); Psort location: Cytoplasmic, score: 7.50.
  
     0.610
ERJ93849.1
KEGG: ral:Rumal_3856 9.9e-177 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 9.67; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.568
ERJ97598.1
NAD dependent epimerase/dehydratase family protein; KEGG: mps:MPTP_0821 8.4e-61 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.567
ERJ94941.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.564
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.543
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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