STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ94906.1Dockerin type I repeat-containing domain protein; KEGG: cly:Celly_0965 4.5e-45 cellulase K01179. (425 aa)    
Predicted Functional Partners:
ERJ94905.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.642
ERJ96686.1
Cellulase; KEGG: ccb:Clocel_0912 1.7e-101 cellulase; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.606
ERJ92483.1
Cellulase; KEGG: cac:CA_C0826 5.4e-82 endoglucanase 5; K01179 endoglucanase; Psort location: Cellwall, score: 9.20.
  
    0.579
ERJ93727.1
Cellulase; KEGG: bde:BDP_2147 4.3e-57 endoglucanase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.566
ERJ86819.1
Cellulase; KEGG: bde:BDP_2147 4.2e-59 endoglucanase family 5; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.561
ERJ96387.1
Cellulase; KEGG: ral:Rumal_0564 5.2e-93 cellulase K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
    0.558
ERJ94904.1
Hypothetical protein; KEGG: pan:PODANSg6819 0.0039 hypothetical protein; K01176 alpha-amylase; Psort location: Cytoplasmic, score: 7.50.
       0.531
ERJ86704.1
Cellulase; KEGG: ral:Rumal_0564 2.5e-54 cellulase K01179; Psort location: Cellwall, score: 9.21.
  
     0.531
ERJ93725.1
Hypothetical protein; KEGG: isc:IscW_ISCW000348 1.2e-36 secreted mucin MUC17, putative; Psort location: Cellwall, score: 9.20.
  
 
  0.499
ERJ93718.1
Dockerin type I repeat-containing domain protein; KEGG: bpb:bpr_I2372 6.4e-166 pel1A; pectate lyase Pel1A K01728.
  
     0.485
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.