STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ94661.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (383 aa)    
Predicted Functional Partners:
ERJ94660.1
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 7.50.
 
     0.853
ERJ96403.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.807
ERJ96404.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.807
ERJ91451.1
N-acetylmuramoyl-L-alanine amidase; KEGG: mas:Mahau_0598 5.2e-29 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50.
  
     0.768
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.768
ERJ96163.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.758
ERJ95226.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.752
ERJ92245.1
Hypothetical protein.
  
     0.746
ERJ97554.1
Hypothetical protein; KEGG: hch:HCH_06735 6.6e-10 copper-translocating P-type ATPase K01533; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.742
ERJ96624.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.