STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ94455.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (384 aa)    
Predicted Functional Partners:
ERJ94458.1
Phage/plasmid primase, P4 family domain protein; KEGG: ppo:PPM_0207 8.7e-15 M1-364; putative P4-specific DNA primase K06919.
 
     0.896
ERJ94457.1
CHC2 zinc finger domain protein; KEGG: amc:MADE_1003765 2.5e-13 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 7.50.
 
     0.860
ERJ94460.1
Plasmid recombination enzyme; KEGG: dvi:Dvir_GJ20094 0.0060 GJ20094 gene product from transcript GJ20094-RA; K00907 myosin-light-chain kinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.839
ERJ94454.1
Hypothetical protein.
       0.773
ERJ94448.1
Hypothetical protein.
  
     0.772
ERJ96289.1
Hypothetical protein; KEGG: cal:CaO19.5970 0.0091 HPR5; similar to S. cerevisiae HPR5 (YJL092W) DNA helicase involved in double strand break repair; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 7.50.
  
     0.767
ERJ94456.1
Hypothetical protein.
       0.752
ERJ94449.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_5256 1.1e-09 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.749
ERJ94451.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ova:OBV_07550 2.3e-74 putative two-component histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.724
ERJ96285.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.712
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.