STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ92541.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (186 aa)    
Predicted Functional Partners:
ERJ96206.1
DNA-binding helix-turn-helix protein; KEGG: mrb:Mrub_2575 2.0e-05 XRE family transcriptional regulator.
 
 
 
 0.803
ERJ92200.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.797
ERJ96219.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.790
ERJ97412.1
DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1631 4.0e-06 XRE family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.763
ERJ97330.1
DNA-binding helix-turn-helix protein; KEGG: efe:EFER_4423 3.9e-06 cII; repressor protein C2; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.763
ERJ97334.1
DNA-binding helix-turn-helix protein; KEGG: clj:CLJU_c36670 1.6e-06 transcriptional regulator; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.763
ERJ91187.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.763
ERJ92540.1
Putative stage II sporulation protein R.
       0.572
ERJ97486.1
DNA-binding helix-turn-helix protein; KEGG: clj:CLJU_c36670 0.0038 transcriptional regulator; K01356 repressor LexA.
    
 
 0.536
ERJ97245.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.536
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.