Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ92197.1 | ERJ92198.1 | RUMCAL_02477 | RUMCAL_02478 | Hypothetical protein. | KEGG: bbe:BBR47_03220 8.3e-11 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.67. | 0.773 |
ERJ92197.1 | ERJ92199.1 | RUMCAL_02477 | RUMCAL_02479 | Hypothetical protein. | KEGG: pit:PIN17_A1108 4.6e-10 M6 family metalloprotease domain-containing protein. | 0.773 |
ERJ92197.1 | ERJ92200.1 | RUMCAL_02477 | RUMCAL_02480 | Hypothetical protein. | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. | 0.639 |
ERJ92198.1 | ERJ92197.1 | RUMCAL_02478 | RUMCAL_02477 | KEGG: bbe:BBR47_03220 8.3e-11 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.67. | Hypothetical protein. | 0.773 |
ERJ92198.1 | ERJ92199.1 | RUMCAL_02478 | RUMCAL_02479 | KEGG: bbe:BBR47_03220 8.3e-11 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.67. | KEGG: pit:PIN17_A1108 4.6e-10 M6 family metalloprotease domain-containing protein. | 0.777 |
ERJ92198.1 | ERJ92200.1 | RUMCAL_02478 | RUMCAL_02480 | KEGG: bbe:BBR47_03220 8.3e-11 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.67. | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. | 0.641 |
ERJ92199.1 | ERJ92197.1 | RUMCAL_02479 | RUMCAL_02477 | KEGG: pit:PIN17_A1108 4.6e-10 M6 family metalloprotease domain-containing protein. | Hypothetical protein. | 0.773 |
ERJ92199.1 | ERJ92198.1 | RUMCAL_02479 | RUMCAL_02478 | KEGG: pit:PIN17_A1108 4.6e-10 M6 family metalloprotease domain-containing protein. | KEGG: bbe:BBR47_03220 8.3e-11 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.67. | 0.777 |
ERJ92199.1 | ERJ92200.1 | RUMCAL_02479 | RUMCAL_02480 | KEGG: pit:PIN17_A1108 4.6e-10 M6 family metalloprotease domain-containing protein. | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. | 0.639 |
ERJ92200.1 | ERJ92197.1 | RUMCAL_02480 | RUMCAL_02477 | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.639 |
ERJ92200.1 | ERJ92198.1 | RUMCAL_02480 | RUMCAL_02478 | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. | KEGG: bbe:BBR47_03220 8.3e-11 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.67. | 0.641 |
ERJ92200.1 | ERJ92199.1 | RUMCAL_02480 | RUMCAL_02479 | DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. | KEGG: pit:PIN17_A1108 4.6e-10 M6 family metalloprotease domain-containing protein. | 0.639 |