STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ92215.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (271 aa)    
Predicted Functional Partners:
ERJ96577.1
KEGG: ctu:CTU_31430 1.5e-13 glnB; nitrogen regulatory protein P-II 1 K04751; Psort location: CytoplasmicMembrane, score: 9.51; Belongs to the P(II) protein family.
   
 
 0.858
ERJ87496.1
Nitrogen regulatory protein P-II; KEGG: psl:Psta_0819 2.2e-75 multi-sensor hybrid histidine kinase K03320; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the P(II) protein family.
   
 
 0.858
ERJ97074.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
    
   0.809
ERJ96776.1
KEGG: apb:SAR116_0107 7.8e-19 nitrogen regulatory protein P-II K04751; Psort location: CytoplasmicMembrane, score: 8.78.
    
 
 0.809
ERJ95569.1
Phage portal protein, HK97 family; Psort location: CytoplasmicMembrane, score: 8.16.
    
   0.809
ERJ94782.1
KEGG: apb:SAR116_0107 1.1e-21 nitrogen regulatory protein P-II K04751; Psort location: CytoplasmicMembrane, score: 9.51; Belongs to the P(II) protein family.
    
 
 0.809
ERJ88892.1
Phage portal protein, HK97 family; Psort location: CytoplasmicMembrane, score: 8.16.
    
   0.809
ERJ86737.1
Hypothetical protein.
    
   0.809
ERJ92214.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
ERJ92216.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.580
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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