STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ91797.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (140 aa)    
Predicted Functional Partners:
ERJ91796.1
Methyltransferase, FkbM family; Psort location: Cytoplasmic, score: 7.50.
  
    0.770
ERJ95225.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.576
ERJ97468.1
ABC transporter, solute-binding protein.
 
     0.484
ERJ96324.1
ABC transporter, solute-binding protein.
 
     0.478
ERJ96493.1
Hypothetical protein.
  
    0.473
ERJ95776.1
Putative acyl carrier protein; KEGG: mme:Marme_3841 0.0017 o-succinylbenzoate--CoA ligase.
  
     0.465
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.