STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ91439.1Dockerin type I repeat-containing domain protein; KEGG: rno:303861 1.4e-12 Cpn2, RGD1305170; carboxypeptidase N, polypeptide 2 K13023. (652 aa)    
Predicted Functional Partners:
ERJ97387.1
Dockerin type I repeat-containing domain protein; KEGG: cce:Ccel_0840 0.0049 glycoside hydrolase; K01179 endoglucanase.
  
     0.702
ERJ91438.1
SCP-like protein.
    
 
0.686
ERJ91437.1
Putative Tat pathway signal sequence domain protein; KEGG: isc:IscW_ISCW008095 1.1e-09 leucine-rich repeat (LRR) protein, putative.
 
    
0.486
ERJ91448.1
Hypothetical protein.
       0.475
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.