STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ90951.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (234 aa)    
Predicted Functional Partners:
ERJ90964.1
4Fe-4S binding domain protein; KEGG: ccl:Clocl_1342 1.7e-16 hypothetical protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta; Psort location: Cytoplasmic, score: 7.50.
 
     0.876
ERJ90961.1
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; KEGG: eha:Ethha_0231 8.0e-49 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.858
ERJ90963.1
3-methyl-2-oxobutanoate dehydrogenase; KEGG: eha:Ethha_0233 1.1e-122 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 7.50.
 
     0.848
ERJ90962.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: cbi:CLJ_B3729 4.5e-94 putative 2-oxoacid:acceptor oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 7.50.
 
     0.846
ERJ97160.1
DNA (cytosine-5-)-methyltransferase; KEGG: efc:EFAU004_01625 8.3e-125 adenine methyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.608
ERJ90811.1
ParB-like protein; KEGG: efc:EFAU004_01625 1.9e-38 adenine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.608
ERJ90804.1
DNA (cytosine-5-)-methyltransferase; KEGG: spa:M6_Spy1144 3.3e-82 adenine-specific methyltransferase K00571; Psort location: Cytoplasmic, score: 7.50; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.608
ERJ88961.1
DNA (cytosine-5-)-methyltransferase; KEGG: efc:EFAU004_01625 1.6e-105 adenine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.608
ERJ88935.1
Hypothetical protein; KEGG: efc:EFAU004_01625 1.6e-107 adenine methyltransferase.
  
 
 0.608
ERJ88925.1
ParB-like protein; KEGG: efc:EFAU004_01625 8.8e-66 adenine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.608
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.