STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ90853.1KEGG: ral:Rumal_1739 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97. (1234 aa)    
Predicted Functional Partners:
purD
KEGG: ral:Rumal_0267 1.2e-162 phosphoribosylamine/glycine ligase K01945; Psort location: Cytoplasmic, score: 7.50; Belongs to the GARS family.
 
 0.999
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
 
 
 0.999
purM
KEGG: ral:Rumal_0260 6.0e-138 phosphoribosylformylglycinamidine cyclo-ligase K01933; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.999
ERJ96660.1
AICARFT/IMPCHase bienzyme; KEGG: ral:Rumal_0271 3.6e-179 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.998
purC
KEGG: ral:Rumal_0258 1.6e-96 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 7.50; Belongs to the SAICAR synthetase family.
 
 0.998
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
 
 0.997
ERJ96665.1
KEGG: ral:Rumal_0259 2.2e-227 Amidophosphoribosyltransferase K00764; Psort location: CytoplasmicMembrane, score: 8.16; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 0.996
carA
KEGG: eha:Ethha_0016 3.7e-115 carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 7.50; Belongs to the CarA family.
  
 
 0.993
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
 
  
 0.990
ERJ86696.1
Adenylosuccinate lyase; KEGG: ral:Rumal_2935 1.8e-184 adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.990
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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