STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ88690.1Dockerin type I repeat-containing domain protein; KEGG: ral:Rumal_0484 1.5e-164 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family. (673 aa)    
Predicted Functional Partners:
ERJ92483.1
Cellulase; KEGG: cac:CA_C0826 5.4e-82 endoglucanase 5; K01179 endoglucanase; Psort location: Cellwall, score: 9.20.
 
  
 0.886
ERJ96387.1
Cellulase; KEGG: ral:Rumal_0564 5.2e-93 cellulase K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.885
ERJ89863.1
Cellulase; KEGG: cpy:Cphy_1163 1.1e-163 cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.808
ERJ87456.1
Cellulase; KEGG: ckn:Calkro_0854 4.0e-141 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.806
ERJ96686.1
Cellulase; KEGG: ccb:Clocel_0912 1.7e-101 cellulase; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.803
ERJ92196.1
Carbohydrate binding domain protein; KEGG: cle:Clole_0675 4.8e-177 cellulose 1,4-beta-cellobiosidase; Psort location: Extracellular, score: 9.98.
  
  
  0.801
ERJ86819.1
Cellulase; KEGG: bde:BDP_2147 4.2e-59 endoglucanase family 5; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.799
ERJ93727.1
Cellulase; KEGG: bde:BDP_2147 4.3e-57 endoglucanase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.797
ERJ97032.1
Glycosyl hydrolase family 10; KEGG: ral:Rumal_1460 2.0e-100 endo-1,4-beta-xylanase K01181; Psort location: Extracellular, score: 9.98.
  
  
 0.788
ERJ96754.1
Ricin-type beta-trefoil lectin domain protein; KEGG: chu:CHU_1157 1.0e-168 rhamnogalacturonan lyase; Psort location: CytoplasmicMembrane, score: 9.87.
  
  
  0.779
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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