STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ88133.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (96 aa)    
Predicted Functional Partners:
ERJ88136.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.831
ERJ88134.1
Resolvase protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
ERJ88135.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
ERJ88137.1
Hypothetical protein.
       0.568
ERJ97468.1
ABC transporter, solute-binding protein.
  
     0.485
cobB
Putative NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
    0.479
ERJ93718.1
Dockerin type I repeat-containing domain protein; KEGG: bpb:bpr_I2372 6.4e-166 pel1A; pectate lyase Pel1A K01728.
  
     0.452
ERJ96169.1
Class II glutamine amidotransferase; KEGG: dde:Dde_0958 3.7e-10 glucosamine 6-phosphate synthetase-like protein; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Psort location: Cytoplasmic, score: 7.50.
  
     0.428
ERJ91451.1
N-acetylmuramoyl-L-alanine amidase; KEGG: mas:Mahau_0598 5.2e-29 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50.
  
     0.420
ERJ96493.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.