STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ87852.1Hypothetical protein. (491 aa)    
Predicted Functional Partners:
ERJ87853.1
Hypothetical protein; KEGG: apb:SAR116_2094 5.1e-07 ABC transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.957
ERJ87854.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3351 2.9e-76 sulfate-transporting ATPase K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.950
ERJ87851.1
Hypothetical protein.
 
     0.900
ERJ91433.1
Hypothetical protein; KEGG: apb:SAR116_2094 2.8e-15 ABC transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.849
ERJ91432.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3351 2.1e-80 sulfate-transporting ATPase K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.791
ERJ87855.1
Glycosyl hydrolase, family 48; KEGG: ral:Rumal_2606 1.7e-195 cellulose 1,4-beta-cellobiosidase; Psort location: Extracellular, score: 9.98.
       0.570
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.