node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ87863.1 | gmk | RUMCAL_03229 | RUMCAL_03223 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.844 |
ERJ87863.1 | rplF | RUMCAL_03229 | RUMCAL_00572 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.878 |
ERJ87863.1 | rplJ | RUMCAL_03229 | RUMCAL_02457 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.910 |
ERJ87863.1 | rpoA | RUMCAL_03229 | RUMCAL_00558 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.862 |
ERJ87863.1 | rpoB | RUMCAL_03229 | RUMCAL_02537 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.949 |
ERJ87863.1 | rpoC | RUMCAL_03229 | RUMCAL_02536 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.909 |
ERJ87863.1 | rpoZ | RUMCAL_03229 | RUMCAL_03224 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.966 |
ERJ87863.1 | rpsL | RUMCAL_03229 | RUMCAL_01125 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.431 |
ERJ95121.1 | rplF | RUMCAL_01698 | RUMCAL_00572 | HNH endonuclease domain protein; KEGG: scl:sce8204 9.5e-69 helicase; Psort location: CytoplasmicMembrane, score: 8.16. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.780 |
ERJ95121.1 | rpoA | RUMCAL_01698 | RUMCAL_00558 | HNH endonuclease domain protein; KEGG: scl:sce8204 9.5e-69 helicase; Psort location: CytoplasmicMembrane, score: 8.16. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
ERJ95121.1 | rpoB | RUMCAL_01698 | RUMCAL_02537 | HNH endonuclease domain protein; KEGG: scl:sce8204 9.5e-69 helicase; Psort location: CytoplasmicMembrane, score: 8.16. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
ERJ95121.1 | rpoC | RUMCAL_01698 | RUMCAL_02536 | HNH endonuclease domain protein; KEGG: scl:sce8204 9.5e-69 helicase; Psort location: CytoplasmicMembrane, score: 8.16. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
ERJ95121.1 | rpoZ | RUMCAL_01698 | RUMCAL_03224 | HNH endonuclease domain protein; KEGG: scl:sce8204 9.5e-69 helicase; Psort location: CytoplasmicMembrane, score: 8.16. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
gmk | ERJ87863.1 | RUMCAL_03223 | RUMCAL_03229 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.844 |
gmk | rpoZ | RUMCAL_03223 | RUMCAL_03224 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.987 |
gmk | rpsL | RUMCAL_03223 | RUMCAL_01125 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.421 |
rplF | ERJ87863.1 | RUMCAL_00572 | RUMCAL_03229 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.878 |
rplF | ERJ95121.1 | RUMCAL_00572 | RUMCAL_01698 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | HNH endonuclease domain protein; KEGG: scl:sce8204 9.5e-69 helicase; Psort location: CytoplasmicMembrane, score: 8.16. | 0.780 |
rplF | rplJ | RUMCAL_00572 | RUMCAL_02457 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplF | rpoA | RUMCAL_00572 | RUMCAL_00558 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |