STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ87637.1Acetyltransferase, GNAT family; KEGG: sgg:SGGBAA2069_c14470 1.9e-15 nhaC; acetyltransferase. (155 aa)    
Predicted Functional Partners:
ERJ97484.1
Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
    
  0.783
ERJ87636.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.557
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.541
ERJ87452.1
Hypothetical protein; KEGG: cvi:CV_2798 7.1e-25 macrolide efflux protein; K00836 diaminobutyrate-2-oxoglutarate transaminase; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.538
ERJ87638.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.533
ERJ87640.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.533
ERJ91773.1
Acetyltransferase, GNAT family; KEGG: lca:LSEI_2791 1.5e-06 acetyltransferase; K03830 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.448
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.413
ERJ96924.1
Methyltransferase domain protein; KEGG: npu:Npun_F6255 3.7e-35 methyltransferase type 11; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.411
ERJ91192.1
Plasmid recombination enzyme; KEGG: edi:EDI_156940 0.00019 trichohyalin; Psort location: Cytoplasmic, score: 7.50.
 
 0.409
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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