Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERJ87460.1 | ERJ87461.1 | RUMCAL_03330 | RUMCAL_03331 | Hypothetical protein. | Sugar-binding domain protein; KEGG: pfe:PSF113_2007 2.7e-32 ribose operon repressor K02529; Psort location: Cytoplasmic, score: 9.97. | 0.535 |
ERJ87460.1 | ERJ87462.1 | RUMCAL_03330 | RUMCAL_03332 | Hypothetical protein. | Hypothetical protein. | 0.469 |
ERJ87461.1 | ERJ87460.1 | RUMCAL_03331 | RUMCAL_03330 | Sugar-binding domain protein; KEGG: pfe:PSF113_2007 2.7e-32 ribose operon repressor K02529; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein. | 0.535 |
ERJ87461.1 | ERJ87462.1 | RUMCAL_03331 | RUMCAL_03332 | Sugar-binding domain protein; KEGG: pfe:PSF113_2007 2.7e-32 ribose operon repressor K02529; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein. | 0.668 |
ERJ87461.1 | ERJ87463.1 | RUMCAL_03331 | RUMCAL_03333 | Sugar-binding domain protein; KEGG: pfe:PSF113_2007 2.7e-32 ribose operon repressor K02529; Psort location: Cytoplasmic, score: 9.97. | KEGG: apb:SAR116_1199 6.0e-05 family 1 extracellular solute-binding protein K02027. | 0.529 |
ERJ87462.1 | ERJ87460.1 | RUMCAL_03332 | RUMCAL_03330 | Hypothetical protein. | Hypothetical protein. | 0.469 |
ERJ87462.1 | ERJ87461.1 | RUMCAL_03332 | RUMCAL_03331 | Hypothetical protein. | Sugar-binding domain protein; KEGG: pfe:PSF113_2007 2.7e-32 ribose operon repressor K02529; Psort location: Cytoplasmic, score: 9.97. | 0.668 |
ERJ87462.1 | ERJ87463.1 | RUMCAL_03332 | RUMCAL_03333 | Hypothetical protein. | KEGG: apb:SAR116_1199 6.0e-05 family 1 extracellular solute-binding protein K02027. | 0.419 |
ERJ87463.1 | ERJ87461.1 | RUMCAL_03333 | RUMCAL_03331 | KEGG: apb:SAR116_1199 6.0e-05 family 1 extracellular solute-binding protein K02027. | Sugar-binding domain protein; KEGG: pfe:PSF113_2007 2.7e-32 ribose operon repressor K02529; Psort location: Cytoplasmic, score: 9.97. | 0.529 |
ERJ87463.1 | ERJ87462.1 | RUMCAL_03333 | RUMCAL_03332 | KEGG: apb:SAR116_1199 6.0e-05 family 1 extracellular solute-binding protein K02027. | Hypothetical protein. | 0.419 |