STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ87217.1Hypothetical protein; KEGG: tsu:Tresu_1057 3.0e-26 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family. (122 aa)    
Predicted Functional Partners:
ERJ92483.1
Cellulase; KEGG: cac:CA_C0826 5.4e-82 endoglucanase 5; K01179 endoglucanase; Psort location: Cellwall, score: 9.20.
 
  
 0.843
ERJ96387.1
Cellulase; KEGG: ral:Rumal_0564 5.2e-93 cellulase K01179; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.841
ERJ87216.1
Hypothetical protein; KEGG: eha:Ethha_0907 1.7e-110 sialate O-acetylesterase K05970.
 
  
  0.799
ERJ88690.1
Dockerin type I repeat-containing domain protein; KEGG: ral:Rumal_0484 1.5e-164 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
  
 
0.769
ERJ96791.1
KEGG: ral:Rumal_1368 8.4e-212 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
     0.758
ERJ96918.1
Beta-mannanase/endoglucanase A domain protein; KEGG: ckn:Calkro_0851 1.5e-102 mannan endo-1,4-beta-mannosidase; Psort location: Cellwall, score: 9.21.
  
  
  0.751
ERJ89863.1
Cellulase; KEGG: cpy:Cphy_1163 1.1e-163 cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.747
ERJ87456.1
Cellulase; KEGG: ckn:Calkro_0854 4.0e-141 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.743
ERJ86819.1
Cellulase; KEGG: bde:BDP_2147 4.2e-59 endoglucanase family 5; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.740
ERJ93727.1
Cellulase; KEGG: bde:BDP_2147 4.3e-57 endoglucanase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.723
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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