STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ86700.1KEGG: bmq:BMQ_2786 2.2e-46 glycosyl hydrolase family 25 protein K07273; Psort location: Extracellular, score: 9.72. (258 aa)    
Predicted Functional Partners:
ERJ86699.1
BNR/Asp-box repeat protein; KEGG: cob:COB47_1664 9.3e-142 cellulose 1,4-beta-cellobiosidase.
       0.773
ERJ94776.1
Glycosyl hydrolase family 25; KEGG: bpb:bpr_I1326 1.1e-25 lyc25B; lysozyme Lyc25B; Psort location: Extracellular, score: 9.60.
  
     0.763
ERJ86701.1
KEGG: ral:Rumal_2865 1.7e-85 mannose-6-phosphate isomerase K01809; Psort location: Cytoplasmic, score: 7.50.
       0.753
ERJ86702.1
Putative glucokinase; KEGG: ral:Rumal_2867 3.0e-129 ROK family glucokinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
       0.742
ERJ86697.1
Putative phosphinothricin N-acetyltransferase; KEGG: ova:OBV_26690 6.8e-59 acetyltransferase K03823; Psort location: Cytoplasmic, score: 7.50.
       0.486
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.