rpmB protein (Coprococcus eutactus) - STRING interaction network

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Score

rpmB

COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score:8.87; Belongs to the bacterial ribosomal protein bL28 family. (81 aa)

Predicted Functional Partners:

rpmG

0.995

rpsT

0.992

rpmF

0.991

rplU

0.991

rplM

0.991

rpsO

0.989

rpsN

0.989

rpmI

0.988

rpmH

0.987

rpsR

0.987

Your Current Organism:

Coprococcus eutactus

NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	COPEUT_02191	COPEUT_00208	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplM	rpmB	COPEUT_02191	COPEUT_00331	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score:8.87; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplM	rpmF	COPEUT_02191	COPEUT_00194	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplM	rpmG	COPEUT_02191	COPEUT_01812	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0267 Ribosomal protein L33; Psort location: Extracellular, score:8.82; Belongs to the bacterial ribosomal protein bL33 family.	0.987
rplM	rpmH	COPEUT_02191	COPEUT_01142	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0230 Ribosomal protein L34; Psort location: Extracellular, score:8.82; Belongs to the bacterial ribosomal protein bL34 family.	0.979
rplM	rpmI	COPEUT_02191	COPEUT_01630	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.992
rplM	rpsN	COPEUT_02191	COPEUT_02168	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.990
rplM	rpsO	COPEUT_02191	COPEUT_00312	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplM	rpsR	COPEUT_02191	COPEUT_01782	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
rplM	rpsT	COPEUT_02191	COPEUT_02847	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplU	rplM	COPEUT_00208	COPEUT_02191	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.992
rplU	rpmB	COPEUT_00208	COPEUT_00331	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0227 Ribosomal protein L28; Psort location: Cytoplasmic, score:8.87; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplU	rpmF	COPEUT_00208	COPEUT_00194	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplU	rpmG	COPEUT_00208	COPEUT_01812	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0267 Ribosomal protein L33; Psort location: Extracellular, score:8.82; Belongs to the bacterial ribosomal protein bL33 family.	0.988
rplU	rpmH	COPEUT_00208	COPEUT_01142	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0230 Ribosomal protein L34; Psort location: Extracellular, score:8.82; Belongs to the bacterial ribosomal protein bL34 family.	0.985
rplU	rpmI	COPEUT_00208	COPEUT_01630	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG: COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.991
rplU	rpsN	COPEUT_00208	COPEUT_02168	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.985
rplU	rpsO	COPEUT_00208	COPEUT_00312	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.988
rplU	rpsR	COPEUT_00208	COPEUT_01782	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.992
rplU	rpsT	COPEUT_00208	COPEUT_02847	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.991