Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP26915.1Hypothetical protein; Psort location: Extracellular, score:8.82. (36 aa)    
Predicted Functional Partners:
EDP26916.1
LD-carboxypeptidase; KEGG: btl:BALH_1226 6.0e-10 ldcA; possible muramoyltetrapeptide carboxypeptidase K01297; COG: COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
       0.478
EDP26913.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.440
thrS
threonine--tRNA ligase; KEGG: sam:MW1626 2.1e-179 thrS; threonyl-tRNA synthetase 1 K01868; COG: COG0441 Threonyl-tRNA synthetase; Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.440
EDP26917.1
Branched-chain amino acid transport protein (AzlD); COG: COG4392 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.99.
       0.421
EDP26918.1
AzlC protein; COG: COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); Psort location: CytoplasmicMembrane, score:9.99.
       0.421
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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