Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP27027.1Hypothetical protein; COG: COG3593 Predicted ATP-dependent endonuclease of the OLD family; Psort location: Cytoplasmic, score:8.87. (559 aa)    
Predicted Functional Partners:
EDP27028.1
UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain protein; KEGG: spr:spr0318 2.7e-44 cps2K; UDPglucose 6-dehydrogenase K00012; COG: COG1004 Predicted UDP-glucose 6-dehydrogenase; Psort location: Cytoplasmic, score:8.87.
       0.567
EDP27025.1
Hypothetical protein; COG: COG0618 Exopolyphosphatase-related proteins; Psort location: Cytoplasmic, score:8.87.
       0.499
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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