Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP27046.1Bacterial transferase hexapeptide repeat protein; KEGG: bth:BT0521 1.7e-19 putative acetyl transferase K00633; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score:9.98. (163 aa)    
Predicted Functional Partners:
EDP27051.1
Hypothetical protein; KEGG: lsl:LSL_0984 5.8e-104 rfaG; glycosyltransferase K00754; COG: COG3754 Lipopolysaccharide biosynthesis protein; Psort location: Cytoplasmic, score:8.87.
 
    0.796
EDP27045.1
Polysaccharide biosynthesis protein; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score:9.99.
  
  
 0.793
EDP27049.1
KEGG: ecj:JW3597 0.00070 rfaL; O-antigen ligase K02847; COG: NOG36406 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
       0.777
EDP27050.1
Glycosyltransferase, group 1 family protein; COG: COG0500 SAM-dependent methyltransferases.
  
  
 0.774
EDP27052.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1559 1.9e-41 rfaG; glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: CytoplasmicMembrane, score:7.80.
  
  
 0.774
EDP27047.1
Hypothetical protein.
       0.773
EDP27048.1
Hypothetical protein; KEGG: efa:EF2489 1.1e-13 MurB family protein K00075; COG: NOG19084 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.773
EDP27053.1
4Fe-4S binding domain protein; KEGG: mth:MTH341 2.3e-12 coenzyme F420-reducing hydrogenase, beta subunit homolog K00439; COG: COG1035 Coenzyme F420-reducing hydrogenase, beta subunit; Psort location: Cytoplasmic, score:8.87.
       0.768
EDP27054.1
KEGG: efa:EF2489 2.5e-17 MurB family protein K00075; COG: NOG19084 non supervised orthologous group.
       0.768
EDP27055.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1561 3.0e-100 rfaG; glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.87.
  
  
 0.721
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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