Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (202 aa)    
Predicted Functional Partners:
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
rfbB
KEGG: ljo:LJ1049 4.4e-154 dTDP-D-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score:8.87; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.999
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 0.996
EDP27045.1
Polysaccharide biosynthesis protein; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score:9.99.
  
  
 0.975
EDP27028.1
UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain protein; KEGG: spr:spr0318 2.7e-44 cps2K; UDPglucose 6-dehydrogenase K00012; COG: COG1004 Predicted UDP-glucose 6-dehydrogenase; Psort location: Cytoplasmic, score:8.87.
  
  
 0.946
glf
KEGG: msu:MS0661 5.1e-144 glf; UDP-galactopyranose mutase K01854; COG: COG0562 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score:8.87.
  
  
 0.933
EDP27044.1
Hypothetical protein; COG: NOG11518 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.97.
  
  
 0.817
EDP27050.1
Glycosyltransferase, group 1 family protein; COG: COG0500 SAM-dependent methyltransferases.
 
  
 0.814
EDP27055.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1561 3.0e-100 rfaG; glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.87.
  
  
 0.811
EDP27038.1
Hypothetical protein; KEGG: mes:Meso_0659 4.2e-05 UTP-glucose-1-phosphate uridylyltransferase K00963; COG: NOG09722 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
  
 0.809
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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