STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP27085.1ThiF family protein; KEGG: cal:orf19.2115 1.8e-29 molybdopterin-converting factor; COG: COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; Psort location: Cytoplasmic, score:8.87. (251 aa)    
Predicted Functional Partners:
EDP27095.1
ThiF family protein; KEGG: hpa:HPAG1_0799 1.9e-59 thiamine biosynthesis protein; COG: COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; Psort location: Cytoplasmic, score:8.87.
 
0.697
thiS
Thiamine biosynthesis protein ThiS; COG: NOG36151 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
  0.585
EDP25831.1
PP-loop family protein; KEGG: nme:NMB1023 1.4e-31 hypothetical protein K04075; COG: COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Psort location: Cytoplasmic, score:8.87; Belongs to the TtcA family.
 
 0.544
EDP27086.1
Transcriptional regulator, Rrf2 family; KEGG: ama:AM656 6.0e-10 aminotransferase, class V K04487; COG: COG1959 Predicted transcriptional regulator.
  
    0.500
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
  0.485
EDP27581.1
Peptidase, U32 family; KEGG: cpe:CPE1882 4.6e-111 probable collagenase K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score:8.87.
  
     0.417
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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