Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sufBFeS assembly protein SufB; COG: COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; Psort location: Cytoplasmic, score:8.87. (468 aa)    
Predicted Functional Partners:
sufC
KEGG: ava:Ava_0425 2.0e-53 sufC; FeS assembly ATPase SufC K09013; COG: COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
 0.999
sufS
Cysteine desulfurase, SufS subfamily; KEGG: cac:CAC3291 1.9e-114 selenocysteine lyase, NifS family K01763; COG: COG0520 Selenocysteine lyase; Psort location: Cytoplasmic, score:8.87; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.993
EDP27117.1
SUF system FeS assembly protein, NifU family; COG: COG0822 NifU homolog involved in Fe-S cluster formation; Psort location: Cytoplasmic, score:8.87.
 
  
 0.992
EDP27119.1
SufB/sufD domain protein; COG: COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; Psort location: Cytoplasmic, score:8.87.
 
  
0.973
EDP25140.1
Hypothetical protein; COG: COG0822 NifU homolog involved in Fe-S cluster formation; Psort location: Cytoplasmic, score:8.87.
  
  
 0.575
EDP27122.1
Transcriptional regulator, Rrf2 family; KEGG: ama:AM656 5.6e-09 aminotransferase, class V K04487; COG: COG1959 Predicted transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
     
 0.532
EDP27115.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 2.5e-41 kdpE; transcriptional regulatory protein KdpE K07667; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
       0.485
EDP27116.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 3.0e-63 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
       0.485
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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