Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP27199.1DNA binding domain, excisionase family; KEGG: pcu:pc0266 0.00065 ptsN, rpoP; putative nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) K02806; COG: NOG17802 non supervised orthologous group. (64 aa)    
Predicted Functional Partners:
EDP27195.1
Hypothetical protein; KEGG: hpa:HPAG1_1468 1.4e-22 hypothetical protein; COG: COG1451 Predicted metal-dependent hydrolase; Psort location: Cytoplasmic, score:8.87.
 
     0.873
hsdM
KEGG: tde:TDE0369 2.0e-243 hsdM-1; type I restriction-modification system, M subunit K03427; COG: COG0286 Type I restriction-modification system methyltransferase subunit; Psort location: Cytoplasmic, score:8.87.
 
     0.863
hsdR
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.853
EDP27197.1
KEGG: lpl:lp_0940 1.0e-51 hsdS1; type Ic restriction-modification system, HsdS subunit K01154; COG: COG0732 Restriction endonuclease S subunits; Psort location: Cytoplasmic, score:8.87.
 
     0.769
EDP27194.1
ATPase family associated with various cellular activities (AAA); KEGG: neu:NE2528 1.5e-90 AAA ATPase superfamily K07452; COG: COG1401 GTPase subunit of restriction endonuclease; Psort location: Cytoplasmic, score:8.87.
       0.608
EDP27193.1
Putative 5-methylcytosine-specific restriction enzyme subunit McrC; COG: COG4268 McrBC 5-methylcytosine restriction system component; Psort location: Cytoplasmic, score:8.87.
       0.602
EDP27192.1
COG: COG3943 Virulence protein; Psort location: Cytoplasmic, score:8.87.
       0.567
EDP27200.1
Hypothetical protein; Psort location: Extracellular, score:8.82.
       0.550
EDP27202.1
Hypothetical protein; COG: NOG07892 non supervised orthologous group.
 
     0.442
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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