Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP27388.1Hypothetical protein; KEGG: bba:Bd3704 5.6e-19 putative zinc metallo protease; COG: COG1451 Predicted metal-dependent hydrolase; Psort location: Cytoplasmic, score:8.87. (190 aa)    
Predicted Functional Partners:
EDP27387.1
KEGG: lla:L67186 2.5e-128 gltA; citrate synthase K01647; COG: COG0372 Citrate synthase; Psort location: Cytoplasmic, score:9.98.
       0.576
EDP27195.1
Hypothetical protein; KEGG: hpa:HPAG1_1468 1.4e-22 hypothetical protein; COG: COG1451 Predicted metal-dependent hydrolase; Psort location: Cytoplasmic, score:8.87.
 
     0.523
hsdR
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.511
hsdM
KEGG: tde:TDE0369 2.0e-243 hsdM-1; type I restriction-modification system, M subunit K03427; COG: COG0286 Type I restriction-modification system methyltransferase subunit; Psort location: Cytoplasmic, score:8.87.
 
     0.501
EDP27386.1
Hypothetical protein; COG: KOG4676 Splicing factor, arginine/serine-rich.
       0.409
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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