Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP27399.1KEGG: spd:SPD_1920 1.2e-08 peptidase, S54 (rhomboid) family protein; COG: COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); Psort location: CytoplasmicMembrane, score:9.99. (194 aa)    
Predicted Functional Partners:
EDP27397.1
Hypothetical protein; KEGG: eci:UTI89_C1034 7.1e-67 yccW; hypothetical protein YccW K06969; COG: COG1092 Predicted SAM-dependent methyltransferases; Psort location: Cytoplasmic, score:8.87.
       0.574
EDP27398.1
Hypothetical protein; COG: COG1305 Transglutaminase-like enzymes, putative cysteine proteases; Psort location: Cytoplasmic, score:8.87.
       0.574
EDP24936.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.3e-53 membrane protease subunits, stomatin/prohibitin homologs K01423; COG: COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
   
 0.415
EDP27753.1
KEGG: tte:TTE2424 1.8e-22 amiC2; N-acetylmuramoyl-L-alanine amidase K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score:8.87.
   
   0.414
EDP27467.1
KEGG: tte:TTE2217 2.4e-34 amiC; N-acetylmuramoyl-L-alanine amidase K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase.
    
   0.406
EDP25336.1
KEGG: lsa:LSA0862 3.1e-26 N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (autolysin) K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase.
    
   0.406
EDP24875.1
KEGG: bce:BC4687 4.9e-36 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG0860 N-acetylmuramoyl-L-alanine amidase.
    
   0.406
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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