Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP26692.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
EDP26691.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.608
EDP26690.1
Hypothetical protein; KEGG: ctc:CTC01841 5.3e-23 PTS system, fructose-specific IIBC component K00890; COG: COG3641 Predicted membrane protein, putative toxin regulator; Psort location: CytoplasmicMembrane, score:9.99.
       0.570
pepD-2
Xaa-His dipeptidase; KEGG: tde:TDE2228 7.0e-108 aminoacyl-histidine dipeptidase, putative K01270; COG: COG2195 Di- and tripeptidases; Psort location: Cytoplasmic, score:8.87.
       0.496
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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