Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDP26439.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EDP26440.1
ATPase, AAA family; KEGG: ava:Ava_B0112 4.5e-120 ATPase K00961:K07478; COG: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; Psort location: Cytoplasmic, score:8.87.
       0.773
EDP26438.1
COG: COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
       0.486
EDP26441.1
Response regulator receiver domain protein; KEGG: bbu:BB0420 2.9e-08 sensory transduction histidine kinase, putative K02489; COG: COG0784 FOG: CheY-like receiver; Psort location: Cytoplasmic, score:8.87.
       0.480
EDP26442.1
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
       0.474
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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