Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP26495.1Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87. (208 aa)    
Predicted Functional Partners:
EDP27372.1
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
  
     0.740
EDP26494.1
AMP-binding enzyme; KEGG: bfr:BF3857 1.1e-59 putative long-chain-fatty-acid-CoA ligase K01897; COG: COG1022 Long-chain acyl-CoA synthetases (AMP-forming); Psort location: CytoplasmicMembrane, score:9.49.
 
     0.676
EDP26492.1
Condensation domain protein; KEGG: rha:RHA1_ro00141 7.5e-07 non-ribosomal peptide synthetase K01776:K01897; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: Cytoplasmic, score:8.87.
 
   
 0.569
EDP26493.1
KEGG: eci:UTI89_C1220 3.6e-08 acpP; acyl carrier protein K02078; COG: COG0236 Acyl carrier protein.
       0.470
EDP27004.1
Putative dihydroxyacetone kinase regulator; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
  
     0.401
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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