Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDP26167.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE0562 8.0e-17 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.99. (444 aa)    
Predicted Functional Partners:
EDP26168.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 0.00012 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family.
 
   
 0.915
EDP26169.1
Hypothetical protein; KEGG: cno:NT01CX_2060 0.00023 putative AgrB-like protein, putative K01423; Psort location: CytoplasmicMembrane, score:9.99.
       0.760
EDP26166.1
Hypothetical protein.
       0.485
EDP27451.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 0.00025 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.87.
 
   
 0.443
typA
KEGG: cch:Cag_1518 7.4e-175 typA; GTP-binding protein TypA K06207; COG: COG1217 Predicted membrane GTPase involved in stress response; Psort location: Cytoplasmic, score:9.98.
       0.442
EDP24866.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 4.1e-07 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.87.
 
   
 0.417
EDP26165.1
Hypothetical protein.
       0.415
EDP26028.1
DNA-binding helix-turn-helix protein; COG: NOG16841 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.412
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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