Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25957.1Oxidoreductase, NAD-binding domain protein; KEGG: lsa:LSA1559 1.2e-71 putative oxidoreductase; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score:8.87. (329 aa)    
Predicted Functional Partners:
EDP25956.1
KEGG: bte:BTH_I1550 1.3e-18 glucokinase/transcriptional regulator, RpiR family, fusion K00845; COG: COG1737 Transcriptional regulators.
 
     0.562
lysS
lysine--tRNA ligase; KEGG: tte:TTE2372 2.3e-154 lysU; lysyl-tRNA synthetase class II K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.532
EDP27312.1
GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 1.0e-65 galactokinase K00849; COG: COG0153 Galactokinase; Psort location: Cytoplasmic, score:8.87; Belongs to the GHMP kinase family.
  
 
 0.485
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
   0.424
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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