Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25696.1Hypothetical protein; Psort location: Extracellular, score:8.82. (42 aa)    
Predicted Functional Partners:
EDP25697.1
KEGG: bcz:BCZK3833 7.9e-13 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.87.
       0.689
EDP25698.1
KEGG: hpa:HPAG1_1162 5.8e-33 ABC transporter, ATP-binding protein K06022; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
       0.601
EDP25699.1
Hypothetical protein; COG: NOG21911 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
       0.542
EDP25700.1
Hypothetical protein.
       0.440
EDP25695.1
Glycosyltransferase, group 1 family protein; KEGG: spd:SPD_0961 1.4e-52 glycosyl transferase, group 1 K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.87.
       0.436
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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