STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25715.1YhgE/Pip domain protein; KEGG: cal:orf19.2410 4.3e-08 IMH1; involved in vesicular transport K01553; COG: COG1511 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00. (707 aa)    
Predicted Functional Partners:
EDP25716.1
Hypothetical protein; KEGG: cal:orf19.2859 0.00076 SRP40; nonribosomal protein of the nucleolus and coiled bodies K01186; COG: COG5651 PPE-repeat proteins.
       0.782
EDP25717.1
Cysteine protease domain, YopT-type; KEGG: cal:orf19.2410 2.6e-08 IMH1; involved in vesicular transport K01553; COG: COG1511 Predicted membrane protein; Psort location: Cellwall, score:8.93.
 
    
0.693
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.439
EDP25719.1
Hypothetical protein.
       0.439
EDP26461.1
Cna protein B-type domain protein; COG: COG4932 Predicted outer membrane protein.
  
     0.405
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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