Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDP25744.1Phage integrase SAM-like domain protein; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score:8.87; Belongs to the 'phage' integrase family. (306 aa)    
Predicted Functional Partners:
EDP27598.1
FtsK/SpoIIIE family protein; KEGG: pen:PSEEN2212 8.1e-122 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score:9.97.
  
   
 0.603
glyA-2
KEGG: mth:MTH1380 2.0e-32 glyA; serine hydroxymethyltransferase K00600; COG: COG0112 Glycine/serine hydroxymethyltransferase; Psort location: Cytoplasmic, score:9.65.
     
 0.501
EDP25745.1
Putative DNA-damage-inducible protein D; COG: NOG06778 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.499
EDP25746.1
Hypothetical protein.
       0.478
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
   
 0.461
apaH
Diadenosine tetraphosphatase; KEGG: tma:TM0742 8.6e-17 serine/threonine protein phosphatase K07313; COG: COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; Psort location: Cytoplasmic, score:8.87.
       0.439
EDP26791.1
comF family protein; KEGG: chu:CHU_3495 1.9e-18 purF; amidophosphoribosyltransferase K00764; COG: COG1040 Predicted amidophosphoribosyltransferases; Psort location: Cytoplasmic, score:8.87.
   
    0.404
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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